Index

_

__array__() (napari_track_edit.data_views.lazy_array_wrapper.LazyArrayWrapper method) __commit_id__ (in module napari_track_edit._version) __contains__() (napari_track_edit.data_views.NodeSelectionHistory method) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory method) __getattr__() (napari_track_edit.data_views.lazy_array_wrapper.LazyArrayWrapper method) __getitem__() (napari_track_edit.data_views.lazy_array_wrapper.LazyArrayWrapper method) (napari_track_edit.data_views.NodeSelectionHistory method) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory method) __iter__() (napari_track_edit.data_views.NodeSelectionHistory method) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory method) __len__() (napari_track_edit.data_views.lazy_array_wrapper.LazyArrayWrapper method) (napari_track_edit.data_views.NodeSelectionHistory method) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory method) __post_init__() (napari_track_edit.data_views.dims_utils.TracksDims method) __repr__() (napari_track_edit.data_views.lazy_array_wrapper.LazyArrayWrapper method) __version__ (in module napari_track_edit._version) __version_tuple__ (in module napari_track_edit._version) _abort_stroke() (napari_track_edit.data_views.views.layers.contour_labels.ContourLabels method) _activate_on_macos() (in module napari_track_edit.__main__) _add_group() (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget method) _add_label() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _add_lineage() (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget method) _add_node() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _add_nodes() (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget method) _add_optional_prop() (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget method) _add_raw_layer() (napari_track_edit.application_menus.welcome_widget.WelcomeWidget method) _add_segmentation_node() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _add_selection() (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget method) _add_to_history() (napari_track_edit.data_views.NodeSelectionHistory method) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory method) _add_track() (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget method) _alpha (napari_track_edit.data_views.colormap.TrackColormap attribute) _animations (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _apply_intensity_layers() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _apply_node_colors() (napari_track_edit.data_views.TrackGraph method) (napari_track_edit.data_views.views.layers.track_graph.TrackGraph method) _ask_intensity_layers() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _ask_merge_track_ids() (napari_track_edit.data_views.TracksViewer static method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer static method) _AXIS_COLOR (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _AXIS_EDGE (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _AXIS_LINE (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _axis_value_column() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _back_to_edit_widget() (napari_track_edit.motile.menus.run_viewer.RunViewer method) _base_colors (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _BASE_SIZE (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _base_sizes (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _bg (napari_track_edit.data_views.views.table.custom_table_widget.TrackTableModel attribute) _browse_csv() (napari_track_edit.import_export.menus.csv_import_widget.ImportCSVWidget method) _browse_geff() (napari_track_edit.import_export.menus.geff_import_widget.ImportGeffWidget method) _browse_save_dir() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) _browse_segmentation() (napari_track_edit.import_export.menus.segmentation_widgets.ExternalSegmentationWidget method) _build_edges() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _build_track_lookups() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _calculate_contour() (napari_track_edit.data_views.views.layers.contour_labels.ContourLabels method) _cancel() (napari_track_edit.import_export.ImportDialog method) (napari_track_edit.import_export.menus.import_dialog.ImportDialog method) _canvas_handlers (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _center_on_rows() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _check_for_duplicates() (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget method) _check_mode() (napari_track_edit.data_views.TrackLabels method) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels method) _checkboxes (napari_track_edit.application_menus.feature_widget.FeatureWidget attribute) (napari_track_edit.application_menus.feature_widget.IntensityLayerDialog attribute) _clear_layout() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _clear_rubber() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _clicked_track_label() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _closed (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _color_lookup() (napari_track_edit.data_views.colormap.TrackColormap method) _color_source (napari_track_edit.data_views.colormap.TrackColormap attribute) _colored() (napari_track_edit.data_views.colormap.TrackColormap method) _columns (napari_track_edit.data_views.views.table.custom_table_widget.TrackTableModel attribute) _commit() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _compute_positions() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _compute_size_scale() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _configure_docks() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _configure_logging() (in module napari_track_edit.__main__) _confirm_overwrite() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) _confirm_raw_download() (napari_track_edit.application_menus.welcome_widget.WelcomeWidget method) _convert_da_to_np_array() (napari_track_edit.motile.menus.run_editor.RunEditor method) _copy_detection() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _copy_label() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _copy_point() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _create_node_attrs() (napari_track_edit.data_views.TrackPoints method) (napari_track_edit.data_views.views.layers.track_points.TrackPoints method) _create_scroll_wrapper() (napari_track_edit.application_menus.menu_manager.MenuManager method) _ctc_raw_layer() (in module napari_track_edit.example_data) _current (napari_track_edit.data_views.NodeSelectionHistory property) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory property) _current_track_node() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _cyclic_colormap (napari_track_edit.data_views.colormap.CategoricalColorSource attribute) _data (napari_track_edit.data_views.lazy_array_wrapper.LazyArrayWrapper attribute) _decimals (napari_track_edit.data_views.views.table.custom_table_widget.TrackTableModel attribute) _default_alpha (napari_track_edit.data_views.colormap.TrackColormap attribute) _DEFAULT_MARKER (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _deleted (napari_track_edit.application_menus.layer_dropdown.LayerDropdown attribute) _describe() (in module napari_track_edit.import_export.sql_io) _describe_node() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _disable_intensity() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _disconnect_tracks() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) _discover_features() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _dock_bottom (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _DOCK_BOTTOM_PX (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _dock_left (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _DOCK_LEFT_MAX_PX (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _DOCK_LEFT_PX (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _DOCK_MINIMAL_PX (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _DOCK_RESIZE_EPS_PX (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _DOCK_TRACK_ID_PX (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _DOCK_WORLD (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _download_dir() (in module napari_track_edit.example_data) _drag_modes (napari_track_edit.data_views.TrackPoints attribute) (napari_track_edit.data_views.views.layers.track_points.TrackPoints attribute) _drag_start (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _drag_start_row (napari_track_edit.data_views.views.table.custom_table_widget.CustomTableWidget attribute) _drive_download_url() (in module napari_track_edit.example_data) _edge_colors (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _EDGE_NONE (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _edges (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _embedded_info_label (napari_track_edit.import_export.menus.segmentation_widgets.GeffSegmentationWidget attribute) _emit_layer_changed() (napari_track_edit.application_menus.layer_dropdown.LayerDropdown method) _emit_run() (napari_track_edit.motile.menus.run_viewer.RunViewer method) _ensure_area_enabled() (napari_track_edit.import_export.ImportDialog method) (napari_track_edit.import_export.menus.import_dialog.ImportDialog method) _ensure_dataset() (in module napari_track_edit.example_data) _ensure_rubber() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _ensure_text_blocks() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot static method) _ensure_valid_label() (napari_track_edit.data_views.TrackLabels method) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels method) _erase_outside() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _export_to_sql() (napari_track_edit.import_export.menus.export_dialog.ExportDialog static method) _feature_key (napari_track_edit.data_views.colormap.TrackColormap attribute) _feature_values() (napari_track_edit.data_views.colormap.TrackColormap method) _fg (napari_track_edit.data_views.views.table.custom_table_widget.TrackTableModel attribute) _figure (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _filled_labels (napari_track_edit.data_views.views.layers.contour_labels.ContourLabels attribute) _finalize_ui() (napari_track_edit.application_menus.main_app.StartupWidget method) (napari_track_edit.application_menus.StartupWidget method) (napari_track_edit.StartupWidget method) _find_dock_widget_by_name() (napari_track_edit.application_menus.menu_manager.MenuManager method) _find_next_valid_index() (napari_track_edit.data_views.NodeSelectionHistory method) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory method) _find_row() (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget method) _finish() (napari_track_edit.import_export.ImportDialog method) (napari_track_edit.import_export.menus.import_dialog.ImportDialog method) _finish_ruler() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _fit_left_dock() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _flag_canvas_closed() (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _follow_ortho_checkbox() (napari_track_edit.application_menus.visualization_widget.VisualizationWidget method) _forget_intensity_layers() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _format() (napari_track_edit.data_views.views.table.custom_table_widget.TrackTableModel method) _geff_has_mask_props() (in module napari_track_edit.import_export.menus.segmentation_widgets) _geff_seg_label (napari_track_edit.import_export.menus.export_dialog.ExportTypeDialog attribute) _generate_axes_metadata() (napari_track_edit.import_export.ImportDialog method) (napari_track_edit.import_export.menus.import_dialog.ImportDialog method) _generate_tracks() (napari_track_edit.motile.menus.motile_widget.MotileWidget method) (napari_track_edit.motile.menus.MotileWidget method) _get_base_type() (in module napari_track_edit.motile.menus.params_editor) _get_foreground_tabs() (napari_track_edit.application_menus.menu_manager.MenuManager method) _get_initial_mapping() (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget method) _get_layer_slicing_state() (napari_track_edit.data_views.views.layers.out_of_slice_points._ZOnlyPoints method) _get_slice_data() (napari_track_edit.data_views.views.layers.out_of_slice_points._ZOnlyPointSliceRequest method) _get_target_layer() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _get_tooltip() (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget method) _get_visible_tabs() (napari_track_edit.application_menus.menu_manager.MenuManager method) _has_segmentation (napari_track_edit.import_export.menus.export_dialog.ExportTypeDialog attribute) _HAS_SIZE_BASED_OUT_OF_SLICE (in module napari_track_edit.data_views.views.layers.out_of_slice_points) _history (napari_track_edit.data_views.NodeSelectionHistory attribute) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory attribute) _history_size (napari_track_edit.data_views.NodeSelectionHistory property) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory property) _id_to_row (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _intensity_layers (napari_track_edit.application_menus.feature_widget.FeatureWidget attribute) _intensity_row() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _invert_selection() (napari_track_edit.application_menus.editing_selection_menu.SelectionWidget method) (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget method) _is_at_end (napari_track_edit.data_views.NodeSelectionHistory property) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory property) _is_at_start (napari_track_edit.data_views.NodeSelectionHistory property) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory property) _is_deleted (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget attribute) _is_fancy_index() (in module napari_track_edit.data_views.lazy_array_wrapper) _is_geff() (napari_track_edit.motile.backend.motile_run.MotileRun static method) (napari_track_edit.motile.backend.MotileRun static method) _iter_index (napari_track_edit.data_views.NodeSelectionHistory attribute) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory attribute) _jump_to_node() (napari_track_edit.application_menus.editing_selection_menu.SelectionWidget method) (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget method) _labels_layer_widget() (napari_track_edit.motile.menus.run_editor.RunEditor method) _lane_track_ids (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _last_shown_set (napari_track_edit.data_views.NodeSelectionHistory attribute) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory attribute) _leading_axes() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _live_intensity_layers() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _load_array() (napari_track_edit.motile.backend.motile_run.MotileRun static method) (napari_track_edit.motile.backend.MotileRun static method) _load_attrs() (napari_track_edit.motile.backend.motile_run.MotileRun static method) (napari_track_edit.motile.backend.MotileRun static method) _load_csv() (napari_track_edit.import_export.menus.csv_import_widget.ImportCSVWidget method) _load_example() (napari_track_edit.application_menus.welcome_widget.WelcomeWidget method) _load_from_dialog() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) _load_geff() (napari_track_edit.import_export.menus.geff_import_widget.ImportGeffWidget method) _load_list() (napari_track_edit.motile.backend.motile_run.MotileRun static method) (napari_track_edit.motile.backend.MotileRun static method) _load_params() (napari_track_edit.motile.backend.motile_run.MotileRun static method) (napari_track_edit.motile.backend.MotileRun static method) _load_tracks() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) _logo_label() (napari_track_edit.application_menus.welcome_widget.WelcomeWidget method) _lookup (napari_track_edit.data_views.colormap.TrackColormap attribute) _make_id() (napari_track_edit.motile.backend.motile_run.MotileRun method) (napari_track_edit.motile.backend.MotileRun method) _make_single_menu_widget_class() (in module napari_track_edit.application_menus.main_app) _make_target_callback() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _make_weak_rename_cb() (napari_track_edit.application_menus.layer_dropdown.LayerDropdown method) _map_node_colors() (napari_track_edit.data_views.TrackPoints method) (napari_track_edit.data_views.views.layers.track_points.TrackPoints method) _MARKER_CODES (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _MARKER_FILL (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _matching_image_layers() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _materialize_fancy() (napari_track_edit.data_views.lazy_array_wrapper.LazyArrayWrapper method) _MAX_SIZE (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _maybe_convert_legacy_masks() (napari_track_edit.import_export.ImportDialog method) (napari_track_edit.import_export.menus.import_dialog.ImportDialog method) _measuring_intensity() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _MIN_SIZE (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _mode (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget attribute) _model (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget attribute) _name_connected (napari_track_edit.application_menus.feature_widget.FeatureWidget attribute) _new_label() (in module napari_track_edit.data_views.views.layers.track_labels) _node_colors (napari_track_edit.data_views.colormap.TrackColormap attribute) _node_ids (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _NODE_LABEL_COLOR (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _NODE_LABEL_DIGIT_WIDTH (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _NODE_LABEL_FONT_FRACTION (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _NODE_LABEL_MAX (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _NODE_LABEL_MIN_SIZE (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _node_labels (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _nrows (napari_track_edit.data_views.views.table.custom_table_widget.TrackTableModel attribute) _old_geff_warning_label (napari_track_edit.import_export.menus.segmentation_widgets.GeffSegmentationWidget attribute) _on_action_applied() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) _on_canvas_pointer_down() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _on_canvas_pointer_move() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _on_canvas_pointer_up() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method)

_on_canvas_wheel() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _on_chain_toggled() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _on_click() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _on_collection_widget_destroyed() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) _on_destroyed() (napari_track_edit.application_menus.layer_dropdown.LayerDropdown method) _on_dock_destroyed() (napari_track_edit.application_menus.menu_manager.MenuManager method) _on_export_type_changed() (napari_track_edit.import_export.menus.export_dialog.ExportTypeDialog method) _on_hover() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _on_hover_leave() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _on_insert() (napari_track_edit.application_menus.layer_dropdown.LayerDropdown method) _on_intensity_toggled() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _on_layer_removed() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _on_layer_renamed() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _on_line_editing_finished() (napari_track_edit.import_export.menus.csv_import_widget.ImportCSVWidget method) (napari_track_edit.import_export.menus.geff_import_widget.ImportGeffWidget method) _on_link_clicked() (napari_track_edit.application_menus.welcome_widget.WelcomeWidget method) _on_overlap_toggled() (napari_track_edit.motile.menus.params_editor.SolverParamsEditor method) _on_paint() (napari_track_edit.data_views.TrackLabels method) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels method) _on_removed() (napari_track_edit.application_menus.layer_dropdown.LayerDropdown method) _on_save_name_edited() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) _on_seg_toggled() (napari_track_edit.import_export.menus.export_dialog.ExportTypeDialog method) _on_selected() (napari_track_edit.application_menus.visualization_widget.ColorByWidget method) _on_selection_changed() (napari_track_edit.application_menus.layer_dropdown.LayerDropdown method) (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget method) _on_single_window_toggled() (napari_track_edit.motile.menus.params_editor.SolverParamsEditor method) _on_solve_complete() (napari_track_edit.motile.menus.motile_widget.MotileWidget method) (napari_track_edit.motile.menus.MotileWidget method) _on_solver_event() (napari_track_edit.motile.menus.motile_widget.MotileWidget method) (napari_track_edit.motile.menus.MotileWidget method) _on_source_dropdown_changed() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _on_toggled() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) (napari_track_edit.application_menus.visualization_widget.ModeWidget method) _on_update_intensity_layers() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _paint() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _paint_region_with_mask() (napari_track_edit.data_views.views.layers.contour_labels.ContourLabels method) _param_label_widget() (napari_track_edit.motile.menus.params_editor.EditableParam method) (napari_track_edit.motile.menus.params_editor.OptionalEditableParam method) _params_group() (napari_track_edit.motile.menus.params_editor.SolverParamsEditor method) (napari_track_edit.motile.menus.params_viewer.SolverParamsViewer method) _parse_paint_event() (napari_track_edit.data_views.TrackLabels static method) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels static method) _pending (napari_track_edit.data_views.colormap.TrackColormap attribute) _plot_widget() (napari_track_edit.motile.menus.run_viewer.RunViewer method) _pointer (napari_track_edit.data_views.NodeSelectionHistory attribute) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory attribute) _populate() (napari_track_edit.application_menus.visualization_widget.ColorByWidget method) _pos_is_populated() (in module napari_track_edit.import_export.sql_io) _POS_SAMPLE_SIZE (in module napari_track_edit.import_export.sql_io) _positions (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _prepare_ruler() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _progress_widget() (napari_track_edit.motile.menus.run_viewer.RunViewer method) _ratio (napari_track_edit.application_menus.copy_from_source_widget.ScaledSvgWidget attribute) _rebind_label (napari_track_edit.import_export.menus.export_dialog.ExportTypeDialog attribute) _rebuild() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _refresh() (napari_track_edit.data_views.TrackGraph method) (napari_track_edit.data_views.TrackLabels method) (napari_track_edit.data_views.TrackPoints method) (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views.layers.track_graph.TrackGraph method) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels method) (napari_track_edit.data_views.views.layers.track_points.TrackPoints method) (napari_track_edit.data_views.views.layers.tracks_layer_group.TracksLayerGroup method) (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) _refresh_features() (napari_track_edit.data_views.views.tree_view.tree_view_feature_widget.TreeViewFeatureWidget method) _refresh_views() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _remember_intensity_layers() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _remove_group() (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget method) _remove_nodes() (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget method) _remove_optional_prop() (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget method) _remove_selection() (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget method) _remove_self() (napari_track_edit.application_menus.main_app.StartupWidget method) (napari_track_edit.application_menus.StartupWidget method) (napari_track_edit.StartupWidget method) _rename_callbacks (napari_track_edit.application_menus.layer_dropdown.LayerDropdown attribute) _replace_label() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _replace_tracks() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) _reset_chain() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _reset_iterator() (napari_track_edit.data_views.NodeSelectionHistory method) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory method) _reset_view() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _resize_dialog() (napari_track_edit.import_export.ImportDialog method) (napari_track_edit.import_export.menus.import_dialog.ImportDialog method) _resolve_name_and_time() (napari_track_edit.motile.backend.motile_run.MotileRun class method) (napari_track_edit.motile.backend.MotileRun class method) _revert_paint() (napari_track_edit.data_views.TrackLabels method) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels method) _RIGHT_CLICK_DRAG_PX (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _row_lineage_ids (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _row_times (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _row_track_ids (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _rows_fit() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _rpress_xy (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _rubber (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _ruler_feature (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _ruler_time (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _run_widget() (napari_track_edit.motile.menus.run_editor.RunEditor method) _save_array() (napari_track_edit.motile.backend.motile_run.MotileRun method) (napari_track_edit.motile.backend.MotileRun method) _save_attrs() (napari_track_edit.motile.backend.motile_run.MotileRun method) (napari_track_edit.motile.backend.MotileRun method) _save_list() (napari_track_edit.motile.backend.motile_run.MotileRun method) (napari_track_edit.motile.backend.MotileRun method) _save_name_edited (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList attribute) _save_params() (napari_track_edit.motile.backend.motile_run.MotileRun method) (napari_track_edit.motile.backend.MotileRun method) _scale_spin_box() (napari_track_edit.import_export.menus.scale_widget.ScaleWidget method) _scatter (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _scrolled (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _select() (napari_track_edit.data_views.views_coordinator.user_dialogs.MergeTrackIDDialog method) _SELECT_BUMP (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _select_bump() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _SELECT_BUMP_MIN (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _SELECT_COLOR (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _SELECT_EDGE_WIDTH (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _select_file() (napari_track_edit.import_export.menus.segmentation_widgets.FileFolderDialog method) _select_folder() (napari_track_edit.import_export.menus.segmentation_widgets.FileFolderDialog method) _select_nodes() (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget method) _select_rows() (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget method) _selected_rows (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _selection_changed() (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget method) (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) _set_chain_icon() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _set_division_edges() (napari_track_edit.data_views.TrackGraph method) (napari_track_edit.data_views.views.layers.track_graph.TrackGraph method) _set_edge_color() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _set_intensity_checked() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _set_mode() (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_view_mode_widget.TreeViewModeWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) _set_pinning_on_graph() (in module napari_track_edit.motile.backend.solve) _set_plot_type() (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_view_feature_widget.TreeViewFeatureWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) _set_solver_label() (napari_track_edit.motile.menus.run_viewer.RunViewer method) _set_track_alpha() (napari_track_edit.data_views.TrackGraph method) (napari_track_edit.data_views.views.layers.track_graph.TrackGraph method) _setup_chunking_constraints() (napari_track_edit.motile.menus.params_editor.SolverParamsEditor method) _setup_source_connection() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _show_export_dialog() (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget method) _size_scale (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _SIZE_SCALE_EPS (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _SKIP_ATTRS (in module napari_track_edit.motile.backend.solve), [1] _sniff_pos_attr() (in module napari_track_edit.import_export.sql_io) _sniff_scale() (in module napari_track_edit.import_export.sql_io) _sniff_time_attr() (in module napari_track_edit.import_export.sql_io) _solve_chunked() (in module napari_track_edit.motile.backend.solve) _solve_full() (in module napari_track_edit.motile.backend.solve) _solve_single_window() (in module napari_track_edit.motile.backend.solve) _solve_window() (in module napari_track_edit.motile.backend.solve) _sort_table() (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget method) _source_layer (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget attribute) _sql_label (napari_track_edit.import_export.menus.export_dialog.ExportTypeDialog attribute) _start_tracking() (napari_track_edit.application_menus.tracking_from_scratch_widget.TrackingFromScratch method) _subplot (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _SYMBOL_SIZE_FACTOR (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _sync_bottom() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _sync_left() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _sync_to_tracks() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _synced_tracks (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget attribute) _syncing (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget attribute) _table (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget attribute) (napari_track_edit.data_views.views.table.custom_table_widget.TrackTableModel attribute) _table_widget (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget attribute) _target_callback (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget attribute) _target_layer (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget attribute) _teardown_source_connection() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _TICK_LABEL_CHAR_PX (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _TICK_LABEL_MARGIN_PX (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _time_label (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _title_widget() (napari_track_edit.motile.menus.motile_widget.MotileWidget method) (napari_track_edit.motile.menus.MotileWidget method) _toggle_chunking_fields() (napari_track_edit.motile.menus.params_editor.SolverParamsEditor method) _toggle_dims() (napari_track_edit.import_export.menus.csv_dimension_widget.DimensionWidget method) _toggle_display_mode() (napari_track_edit.data_views.views.tree_view.tree_view_mode_widget.TreeViewModeWidget method) _toggle_plot_type() (napari_track_edit.data_views.views.tree_view.tree_view_feature_widget.TreeViewFeatureWidget method) _toggle_segmentation() (napari_track_edit.import_export.menus.segmentation_widgets.CSVSegmentationWidget method) (napari_track_edit.import_export.menus.segmentation_widgets.GeffSegmentationWidget method) _toggling (napari_track_edit.application_menus.feature_widget.FeatureWidget attribute) _TOOLTIP_OFFSET (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _track_id_axis_shown() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _track_id_button_style() (in module napari_track_edit.data_views.views_coordinator.user_dialogs) _TRACK_LABEL_MAX (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _TRACK_LABEL_MIN_PX (in module napari_track_edit.data_views.views.tree_view.tree_plot_fpl) _track_labels (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) _tracks (napari_track_edit.application_menus.feature_widget.FeatureWidget attribute) (napari_track_edit.data_views.colormap.TrackColormap attribute) _TRACKSDATA_INTERNAL_EDGE_KEYS (in module napari_track_edit.motile.backend.motile_run) _type_string (napari_track_edit.data_views.TrackGraph attribute) (napari_track_edit.data_views.TrackLabels property) (napari_track_edit.data_views.TrackPoints property) (napari_track_edit.data_views.views.layers.contour_labels.ContourLabels property) (napari_track_edit.data_views.views.layers.track_graph.TrackGraph attribute) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels property) (napari_track_edit.data_views.views.layers.track_points.TrackPoints property) _unpack_id() (napari_track_edit.motile.backend.motile_run.MotileRun static method) (napari_track_edit.motile.backend.MotileRun static method) _update_buttons() (napari_track_edit.application_menus.tracking_from_scratch_widget.TrackingFromScratch method) _update_buttons_and_node_count() (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget method) _update_checkboxes() (napari_track_edit.application_menus.feature_widget.FeatureWidget method) _update_copy_controls_visibility() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _update_data() (napari_track_edit.data_views.TrackPoints method) (napari_track_edit.data_views.views.layers.track_points.TrackPoints method) _update_dropdown() (napari_track_edit.application_menus.layer_dropdown.LayerDropdown method) _update_feature() (napari_track_edit.data_views.views.tree_view.tree_view_feature_widget.TreeViewFeatureWidget method) _update_field_map_and_scale() (napari_track_edit.import_export.ImportDialog method) (napari_track_edit.import_export.menus.import_dialog.ImportDialog method) _update_finish_button() (napari_track_edit.import_export.ImportDialog method) (napari_track_edit.import_export.menus.import_dialog.ImportDialog method) _update_lineage_df() (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) _update_marker_scale() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _update_max_frames() (napari_track_edit.motile.menus.run_editor.RunEditor method) _update_mode() (napari_track_edit.application_menus.visualization_widget.VisualizationWidget method) _update_node_labels() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _update_on_disk_label() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) _update_overlap_constraints() (napari_track_edit.motile.menus.params_editor.SolverParamsEditor method) _update_props_left() (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget method) _update_rubber() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _update_rulers() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _update_save_name() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) _update_segmentation_widget() (napari_track_edit.import_export.ImportDialog method) (napari_track_edit.import_export.menus.import_dialog.ImportDialog method) _update_selected() (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) _update_selection() (napari_track_edit.data_views.TrackPoints method) (napari_track_edit.data_views.views.layers.track_points.TrackPoints method) _update_source_controls() (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget method) _update_track_data() (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) _update_track_labels() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _update_viewed_data() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) _update_visualization() (napari_track_edit.application_menus.visualization_widget.VisualizationWidget method) _update_widget_availability() (napari_track_edit.application_menus.visualization_widget.VisualizationWidget method) _validate_color_feature() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) _verify_path() (napari_track_edit.import_export.menus.segmentation_widgets.ExternalSegmentationWidget method) _watch_name() (napari_track_edit.application_menus.layer_dropdown.LayerDropdown method) _wrap_tooltip() (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget method) _write_new_database() (in module napari_track_edit.import_export.sql_io) _zenodo_raw_layer() (in module napari_track_edit.example_data) _ZOnlyPoints (class in napari_track_edit.data_views.views.layers.out_of_slice_points) _ZOnlyPointSliceRequest (class in napari_track_edit.data_views.views.layers.out_of_slice_points) _ZOnlyPointsSlicingState (class in napari_track_edit.data_views.views.layers.out_of_slice_points)

A

active_tabs (napari_track_edit.application_menus.menu_manager.MenuManager attribute) add() (napari_track_edit.data_views.NodeSelectionHistory method) (napari_track_edit.data_views.TrackPoints method) (napari_track_edit.data_views.views.layers.track_points.TrackPoints method) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory method) add_lineage_btn (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget attribute) add_list() (napari_track_edit.data_views.NodeSelectionHistory method) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory method) add_napari_layers() (napari_track_edit.data_views.views.layers.tracks_layer_group.TracksLayerGroup method) add_node() (napari_track_edit.data_views.colormap.TrackColormap method) add_nodes_btn (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget attribute) add_track_btn (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget attribute)

add_tracks() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) allow_none (napari_track_edit.application_menus.layer_dropdown.LayerDropdown attribute) appear_cost (napari_track_edit.motile.backend.solver_params.SolverParams attribute) (napari_track_edit.motile.backend.SolverParams attribute) as_list (napari_track_edit.data_views.NodeSelectionHistory property) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory property) ascending (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget attribute) ask_connect_mode() (in module napari_track_edit.data_views.views_coordinator.user_dialogs) attribute (napari_track_edit.motile.backend.solve.TernaryPin attribute) ATTRS_FILENAME (in module napari_track_edit.motile.backend.motile_run) auto_new_track_checkbox (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget attribute) axis_order (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute)

B

background_opacity (napari_track_edit.data_views.TrackLabels attribute) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels attribute) background_widget (napari_track_edit.application_menus.visualization_widget.VisualizationWidget attribute) BASE_TEXT (in module napari_track_edit.data_views.views_coordinator.tracks_viewer) BinaryColorSource (class in napari_track_edit.data_views.colormap) bind_keymap() (in module napari_track_edit.data_views.keybindings_config) box (napari_track_edit.application_menus.feature_widget.FeatureWidget attribute)

build_candidate_graph() (in module napari_track_edit.motile.backend) (in module napari_track_edit.motile.backend.solve) button_for_mode() (napari_track_edit.application_menus.visualization_widget.ModeWidget method) button_group (napari_track_edit.import_export.menus.csv_dimension_widget.DimensionWidget attribute) (napari_track_edit.import_export.menus.segmentation_widgets.CSVSegmentationWidget attribute) (napari_track_edit.import_export.menus.segmentation_widgets.GeffSegmentationWidget attribute) button_layout (napari_track_edit.import_export.ImportDialog attribute) (napari_track_edit.import_export.menus.import_dialog.ImportDialog attribute)

C

cancel_btn (napari_track_edit.data_views.views_coordinator.user_dialogs.MergeTrackIDDialog attribute) cancel_button (napari_track_edit.import_export.ImportDialog attribute) (napari_track_edit.import_export.menus.import_dialog.ImportDialog attribute) categorical_feature_keys() (in module napari_track_edit.data_views.colormap) CategoricalColorSource (class in napari_track_edit.data_views.colormap) center_node (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) center_node() (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget method) center_on_node() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) center_view() (napari_track_edit.data_views.views.layers.tracks_layer_group.TracksLayerGroup method) chain_btn (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget attribute) change_mode (napari_track_edit.data_views.views.tree_view.tree_view_mode_widget.TreeViewModeWidget attribute) change_plot_type (napari_track_edit.data_views.views.tree_view.tree_view_feature_widget.TreeViewFeatureWidget attribute) channel_hint (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget attribute) checkbox_layout (napari_track_edit.application_menus.feature_widget.FeatureWidget attribute) cleanup() (napari_track_edit.application_menus.track_list_widget.TrackListWidget method) (napari_track_edit.application_menus.visualization_widget.VisualizationWidget method) (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) clear() (napari_track_edit.data_views.NodeSelectionHistory method) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory method) clear_layout() (in module napari_track_edit.import_export.menus.geff_import_utils) clear_tracks() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) click() (napari_track_edit.data_views.TrackLabels method) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels method) close_database() (in module napari_track_edit.import_export.sql_io) close_figure() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) closeEvent() (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) collection (napari_track_edit.data_views.views_coordinator.groups.CollectionButton attribute) collection_list (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget attribute) collection_widget (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) CollectionButton (class in napari_track_edit.data_views.views_coordinator.groups) CollectionWidget (class in napari_track_edit.data_views.views_coordinator.groups) color (napari_track_edit.data_views.colormap.ConstantColorSource attribute) color_by_widget (napari_track_edit.application_menus.visualization_widget.VisualizationWidget attribute) color_feature_available() (in module napari_track_edit.data_views.colormap) color_feature_key (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) color_source (napari_track_edit.data_views.colormap.TrackColormap property) ColorByWidget (class in napari_track_edit.application_menus.visualization_widget) ColoredTableWidget (class in napari_track_edit.data_views.views.table.custom_table_widget)

colormap (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) colormap_hook() (in module napari_track_edit.data_views.views.ortho_views) colormap_updated (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) colors_by_track_id (napari_track_edit.data_views.colormap.TrackColormap property) ColorSource (class in napari_track_edit.data_views.colormap) columnCount() (napari_track_edit.data_views.views.table.custom_table_widget.TrackTableModel method) combo (napari_track_edit.application_menus.visualization_widget.ColorByWidget attribute) commit_id (in module napari_track_edit._version) configure_wgpu_backend() (in module napari_track_edit) (in module napari_track_edit._wgpu_setup) confirm_force_operation() (in module napari_track_edit.data_views.views_coordinator.user_dialogs) connect_nodes() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) connect_nodes_btn (napari_track_edit.application_menus.editing_selection_menu.EditingMenu attribute) connect_nodes_linearly() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) connect_nodes_with_divisions() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) ConstantColorSource (class in napari_track_edit.data_views.colormap) construct_direct_colormap() (in module napari_track_edit.data_views.colormap) construct_solver() (in module napari_track_edit.motile.backend.solve) content_widget (napari_track_edit.import_export.ImportDialog attribute) (napari_track_edit.import_export.menus.import_dialog.ImportDialog attribute) CONTINUE (napari_track_edit.data_views.node_type.NodeType attribute) contour (napari_track_edit.application_menus.visualization_widget.VisualizationConfigWidget attribute) ContourLabels (class in napari_track_edit.data_views.views.layers.contour_labels) convert_4d_arr_to_zarr() (in module napari_track_edit.example_data) convert_to_zarr() (in module napari_track_edit.example_data) copy_controls_box (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget attribute) copy_detection_hook() (in module napari_track_edit.data_views.views.ortho_views) copy_from_source_widget (napari_track_edit.application_menus.editing_selection_menu.EditingSelectionWidget attribute) COPY_ILLUSTRATION (in module napari_track_edit.application_menus.copy_from_source_widget) copy_layer() (in module napari_track_edit.data_views.views.ortho_views) CopyFromSourceWidget (class in napari_track_edit.application_menus.copy_from_source_widget) csv_browse_button (napari_track_edit.import_export.menus.csv_import_widget.ImportCSVWidget attribute) csv_path_line (napari_track_edit.import_export.menus.csv_import_widget.ImportCSVWidget attribute) CSVSegmentationWidget (class in napari_track_edit.import_export.menus.segmentation_widgets) CTC_ARRAYS (in module napari_track_edit.example_data) CTC_URL_TEMPLATE (in module napari_track_edit.example_data) current_mode (napari_track_edit.application_menus.visualization_widget.ModeWidget property) custom_select() (in module napari_track_edit.data_views.views.layers.track_points) CustomTableWidget (class in napari_track_edit.data_views.views.table.custom_table_widget)

D

data (napari_track_edit.data_views.views.layers.out_of_slice_points._ZOnlyPointSliceRequest attribute) data() (napari_track_edit.data_views.views.table.custom_table_widget.TrackTableModel method) data_setitem() (napari_track_edit.data_views.views.layers.contour_labels.ContourLabels method) data_slice (napari_track_edit.data_views.views.layers.out_of_slice_points._ZOnlyPointSliceRequest attribute) data_updated (napari_track_edit.data_views.TrackPoints attribute) (napari_track_edit.data_views.views.layers.track_points.TrackPoints attribute) default_save_dir() (in module napari_track_edit.data_views.views_coordinator.tracks_list) default_size (napari_track_edit.data_views.TrackPoints attribute) (napari_track_edit.data_views.views.layers.track_points.TrackPoints attribute) delete (napari_track_edit.data_views.views_coordinator.groups.CollectionButton attribute) (napari_track_edit.data_views.views_coordinator.tracks_list.TracksButton attribute) delete() (napari_track_edit.motile.backend.motile_run.MotileRun method) (napari_track_edit.motile.backend.MotileRun method) delete_node() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) delete_node_btn (napari_track_edit.application_menus.editing_selection_menu.EditingMenu attribute) deleted_items (napari_track_edit.data_views.NodeSelectionHistory attribute) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory attribute) deselect() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) deselect_btn (napari_track_edit.application_menus.editing_selection_menu.SelectionWidget attribute)

destroy_menu_widget() (napari_track_edit.application_menus.menu_manager.MenuManager method) detect_click() (in module napari_track_edit.data_views.views.layers.click_utils) detect_side_button() (in module napari_track_edit.data_views.views.layers.click_utils) df (napari_track_edit.import_export.ImportDialog attribute) (napari_track_edit.import_export.menus.csv_import_widget.ImportCSVWidget attribute) (napari_track_edit.import_export.menus.import_dialog.ImportDialog attribute) DimensionWidget (class in napari_track_edit.import_export.menus.csv_dimension_widget) dims (napari_track_edit.data_views.views.layers.out_of_slice_points._ZOnlyPointSliceRequest attribute) dir_name (napari_track_edit.import_export.menus.geff_import_widget.ImportGeffWidget attribute) disconnect_nodes() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) disconnect_nodes_btn (napari_track_edit.application_menus.editing_selection_menu.EditingMenu attribute) distance_cost (napari_track_edit.motile.backend.solver_params.SolverParams attribute) (napari_track_edit.motile.backend.SolverParams attribute) division_cost (napari_track_edit.motile.backend.solver_params.SolverParams attribute) (napari_track_edit.motile.backend.SolverParams attribute) DOCS_URL (in module napari_track_edit.application_menus.welcome_widget) download_ctc_dataset() (in module napari_track_edit.example_data) download_progress() (in module napari_track_edit.download_progress) download_zenodo_dataset() (in module napari_track_edit.example_data) download_zipped_store() (in module napari_track_edit.example_data) DownloadCancelled DRIVERNAME (in module napari_track_edit.import_export.sql_io) dropdown_menu (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList attribute) dtype (napari_track_edit.data_views.lazy_array_wrapper.LazyArrayWrapper property) (napari_track_edit.motile.menus.params_editor.EditableParam attribute)

E

edge_selection_cost (napari_track_edit.motile.backend.solver_params.SolverParams attribute) (napari_track_edit.motile.backend.SolverParams attribute) edit_run (napari_track_edit.motile.menus.run_viewer.RunViewer attribute) edit_run() (napari_track_edit.motile.menus.motile_widget.MotileWidget method) (napari_track_edit.motile.menus.MotileWidget method) edit_run_widget (napari_track_edit.motile.menus.motile_widget.MotileWidget attribute) (napari_track_edit.motile.menus.MotileWidget attribute) EditableParam (class in napari_track_edit.motile.menus.params_editor) EditableParamValue (class in napari_track_edit.motile.menus.param_values) editing_widget (napari_track_edit.application_menus.editing_selection_menu.EditingSelectionWidget attribute) EditingGroupWidget (class in napari_track_edit.application_menus.main_app) EditingMenu (class in napari_track_edit.application_menus.editing_selection_menu) EditingSelection_LauncherWidget (in module napari_track_edit.application_menus.main_app) EditingSelectionWidget (class in napari_track_edit.application_menus.editing_selection_menu) embed_point() (napari_track_edit.data_views.dims_utils.TracksDims method) emit_run() (napari_track_edit.motile.menus.run_editor.RunEditor method) END (napari_track_edit.data_views.node_type.NodeType attribute)

eventFilter() (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) EXAMPLE_SCHEME (in module napari_track_edit.application_menus.welcome_widget) exclude_types (napari_track_edit.application_menus.layer_dropdown.LayerDropdown attribute) export (napari_track_edit.data_views.views_coordinator.groups.CollectionButton attribute) (napari_track_edit.data_views.views_coordinator.tracks_list.TracksButton attribute) export_type (napari_track_edit.import_export.menus.export_dialog.ExportTypeDialog property) export_type_combo (napari_track_edit.import_export.menus.export_dialog.ExportTypeDialog attribute) ExportDialog (class in napari_track_edit.import_export.menus.export_dialog) ExportTypeDialog (class in napari_track_edit.import_export.menus.export_dialog) external_segmentation_radio (napari_track_edit.import_export.menus.segmentation_widgets.CSVSegmentationWidget attribute) (napari_track_edit.import_export.menus.segmentation_widgets.GeffSegmentationWidget attribute) ExternalSegmentationWidget (class in napari_track_edit.import_export.menus.segmentation_widgets) extract_csv_property_fields() (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget method) extract_geff_property_fields() (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget method) extract_lineage_tree() (in module napari_track_edit.data_views.views.tree_view.tree_widget_utils) extract_sorted_tracks() (in module napari_track_edit.data_views.views.tree_view.tree_widget_utils)

F

false_color (napari_track_edit.data_views.colormap.BinaryColorSource attribute) feature (napari_track_edit.data_views.views.tree_view.navigation_widget.NavigationWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) feature_display_name() (in module napari_track_edit.data_views.colormap) feature_dropdown (napari_track_edit.data_views.views.tree_view.tree_view_feature_widget.TreeViewFeatureWidget attribute) feature_key (napari_track_edit.data_views.colormap.TrackColormap property) Feature_LauncherWidget (in module napari_track_edit.application_menus.main_app) FeatureWidget (class in napari_track_edit.application_menus.feature_widget) FIELD_ALIASES (in module napari_track_edit.import_export.menus.prop_map_widget) file_button (napari_track_edit.import_export.menus.segmentation_widgets.FileFolderDialog attribute) file_dialog (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList attribute) FileFolderDialog (class in napari_track_edit.import_export.menus.segmentation_widgets) filled_labels (napari_track_edit.data_views.views.layers.contour_labels.ContourLabels property) filter_visible_nodes() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) find_geff_group() (in module napari_track_edit.import_export.menus.geff_import_utils) find_root() (in module napari_track_edit.data_views.views.tree_view.tree_widget_utils) finish_button (napari_track_edit.import_export.ImportDialog attribute) (napari_track_edit.import_export.menus.import_dialog.ImportDialog attribute) flags() (napari_track_edit.data_views.views.table.custom_table_widget.TrackTableModel method)

flip() (napari_track_edit.data_views.views.tree_view.flip_axes_widget.FlipTreeWidget method) flip_axes() (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) flip_tree (napari_track_edit.data_views.views.tree_view.flip_axes_widget.FlipTreeWidget attribute) flip_widget (napari_track_edit.data_views.TreeWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget attribute) FlipTreeWidget (class in napari_track_edit.data_views.views.tree_view.flip_axes_widget) Fluo_N2DL_HeLa() (in module napari_track_edit.example_data) Fluo_N2DL_HeLa_crop() (in module napari_track_edit.example_data) Fluo_N2DL_HeLa_crop_raw() (in module napari_track_edit.example_data) folder_button (napari_track_edit.import_export.menus.segmentation_widgets.FileFolderDialog attribute) follow_active (napari_track_edit.application_menus.layer_dropdown.LayerDropdown attribute) force (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) foreground_contour (napari_track_edit.data_views.TrackLabels attribute) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels attribute) foreground_opacity (napari_track_edit.data_views.TrackLabels attribute) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels attribute) foreground_widget (napari_track_edit.application_menus.visualization_widget.VisualizationWidget attribute) full_division_edges (napari_track_edit.data_views.TrackGraph attribute) (napari_track_edit.data_views.views.layers.track_graph.TrackGraph attribute)

G

gap_plot (napari_track_edit.motile.menus.run_viewer.RunViewer attribute) gaps (napari_track_edit.motile.backend.motile_run.MotileRun attribute) (napari_track_edit.motile.backend.MotileRun attribute) GAPS_FILENAME (in module napari_track_edit.motile.backend.motile_run) geff_browse_button (napari_track_edit.import_export.menus.geff_import_widget.ImportGeffWidget attribute) geff_group_path() (in module napari_track_edit.import_export.menus.geff_import_utils) geff_path() (napari_track_edit.motile.backend.motile_run.MotileRun static method) (napari_track_edit.motile.backend.MotileRun static method) geff_path_line (napari_track_edit.import_export.menus.geff_import_widget.ImportGeffWidget attribute) GEFF_SUFFIX (in module napari_track_edit.data_views.views_coordinator.tracks_list) GeffSegmentationWidget (class in napari_track_edit.import_export.menus.segmentation_widgets) GENERAL_KEY_ACTIONS (in module napari_track_edit.data_views.keybindings_config) get_alpha() (napari_track_edit.data_views.colormap.TrackColormap method) get_attr_dtype_pandas() (in module napari_track_edit.import_export.menus.prop_map_widget) get_attr_dtype_zarr() (in module napari_track_edit.import_export.menus.prop_map_widget) get_click_value() (in module napari_track_edit.data_views.views.layers.click_utils) get_collection_widget() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) get_color() (napari_track_edit.data_views.colormap.TrackColormap method) get_colors() (napari_track_edit.data_views.colormap.TrackColormap method) get_contours() (in module napari_track_edit.data_views.views.layers.contour_labels) get_current_feature() (napari_track_edit.data_views.views.tree_view.tree_view_feature_widget.TreeViewFeatureWidget method) get_features (napari_track_edit.data_views.views.tree_view.tree_view_feature_widget.TreeViewFeatureWidget attribute) get_features_from_tracks() (in module napari_track_edit.data_views.views.tree_view.tree_widget_utils) get_input_layer() (napari_track_edit.motile.menus.run_editor.RunEditor method) get_instance() (napari_track_edit.data_views.TracksViewer class method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer class method) get_name_map() (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget method)

get_next_track_node() (napari_track_edit.data_views.views.tree_view.navigation_widget.NavigationWidget method) get_predecessor() (napari_track_edit.data_views.views.tree_view.navigation_widget.NavigationWidget method) get_property_names_from_class() (in module napari_track_edit.data_views.views.ortho_views) get_recompute_keys() (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget method) get_run() (napari_track_edit.motile.menus.run_editor.RunEditor method) get_scale() (napari_track_edit.import_export.menus.scale_widget.ScaleWidget method) get_segmentation_path() (napari_track_edit.import_export.menus.segmentation_widgets.CSVSegmentationWidget method) (napari_track_edit.import_export.menus.segmentation_widgets.ExternalSegmentationWidget method) (napari_track_edit.import_export.menus.segmentation_widgets.GeffSegmentationWidget method) get_selected_path() (napari_track_edit.import_export.menus.segmentation_widgets.FileFolderDialog method) get_solver_name() (in module napari_track_edit.motile.backend) (in module napari_track_edit.motile.backend.solve) get_sorted_track_ids() (in module napari_track_edit.data_views.views.tree_view.tree_widget_utils) get_successor() (napari_track_edit.data_views.views.tree_view.navigation_widget.NavigationWidget method) get_symbols() (napari_track_edit.data_views.TrackPoints method) (napari_track_edit.data_views.views.layers.track_points.TrackPoints method) get_tracklets() (in module napari_track_edit.data_views.views.tree_view.tree_widget_utils) get_value() (napari_track_edit.motile.menus.param_values.EditableParamValue method) (napari_track_edit.motile.menus.param_values.StaticParamValue method) GettingStarted_LauncherWidget (in module napari_track_edit.application_menus.main_app) graph (napari_track_edit.data_views.TreeWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget attribute) graphview_to_motile_dicts() (in module napari_track_edit.motile.backend.solve) GREY (in module napari_track_edit.data_views.colormap) group_changed (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget attribute) group_name (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget attribute) Groups_LauncherWidget (in module napari_track_edit.application_menus.main_app) GroupWidget (class in napari_track_edit.application_menus.group_widget)

H

has_duplicates (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget attribute) has_next_set (napari_track_edit.data_views.NodeSelectionHistory property) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory property) has_previous_set (napari_track_edit.data_views.NodeSelectionHistory property) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory property) has_valid_last_shown_set (napari_track_edit.data_views.NodeSelectionHistory property) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory property) hasHeightForWidth() (napari_track_edit.application_menus.copy_from_source_widget.ScaledSvgWidget method) headerData() (napari_track_edit.data_views.views.table.custom_table_widget.TrackTableModel method) heightForWidth() (napari_track_edit.application_menus.copy_from_source_widget.ScaledSvgWidget method)

HELA_CROP (in module napari_track_edit.example_data) hidden (napari_track_edit.application_menus.menu_manager.MenuManager attribute) hide_panels() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) highlight_contour (napari_track_edit.data_views.TrackLabels attribute) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels attribute) highlight_opacity (napari_track_edit.data_views.TrackLabels attribute) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels attribute) highlight_widget (napari_track_edit.application_menus.visualization_widget.VisualizationWidget attribute) hover_info_checkbox (napari_track_edit.data_views.views.tree_view.tree_view_options_widget.TreeViewOptionsWidget attribute)

I

illustration (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget attribute) image_browse_button (napari_track_edit.import_export.menus.segmentation_widgets.ExternalSegmentationWidget attribute) image_path_line (napari_track_edit.import_export.menus.segmentation_widgets.ExternalSegmentationWidget attribute) import_type (napari_track_edit.import_export.ImportDialog attribute) (napari_track_edit.import_export.menus.import_dialog.ImportDialog attribute) ImportCSVWidget (class in napari_track_edit.import_export.menus.csv_import_widget) ImportDialog (class in napari_track_edit.import_export) (class in napari_track_edit.import_export.menus.import_dialog) ImportGeffWidget (class in napari_track_edit.import_export.menus.geff_import_widget) IN_POINTS_FILENAME (in module napari_track_edit.motile.backend.motile_run) incl_z (napari_track_edit.import_export.ImportDialog attribute) (napari_track_edit.import_export.menus.csv_dimension_widget.DimensionWidget attribute) (napari_track_edit.import_export.menus.import_dialog.ImportDialog attribute) (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget attribute) include_seg() (napari_track_edit.import_export.menus.segmentation_widgets.CSVSegmentationWidget method) (napari_track_edit.import_export.menus.segmentation_widgets.GeffSegmentationWidget method) infer_dims_from_segmentation() (napari_track_edit.import_export.ImportDialog method) (napari_track_edit.import_export.menus.import_dialog.ImportDialog method)

initialize_menu() (napari_track_edit.application_menus.menu_manager.MenuManager method) initialize_ortho_views() (in module napari_track_edit.data_views.views.ortho_views) initialized_menu_widgets (napari_track_edit.application_menus.menu_manager.MenuManager attribute) input_points (napari_track_edit.motile.backend.motile_run.MotileRun attribute) (napari_track_edit.motile.backend.MotileRun attribute) input_segmentation (napari_track_edit.motile.backend.motile_run.MotileRun attribute) (napari_track_edit.motile.backend.MotileRun attribute) instantiate() (napari_track_edit.motile.backend.solve.TernaryPin method) intensity_checkbox (napari_track_edit.application_menus.feature_widget.FeatureWidget attribute) IntensityLayerDialog (class in napari_track_edit.application_menus.feature_widget) interacting_with_canvas (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) invert_btn (napari_track_edit.application_menus.editing_selection_menu.SelectionWidget attribute) iou_cost (napari_track_edit.motile.backend.solver_params.SolverParams attribute) (napari_track_edit.motile.backend.SolverParams attribute) iou_row (napari_track_edit.motile.menus.params_editor.SolverParamsEditor attribute) is_geff() (in module napari_track_edit.import_export.geff_io) is_same_database() (in module napari_track_edit.import_export.sql_io) is_sql_backed() (in module napari_track_edit.import_export.sql_io)

J

jump_to_next_btn (napari_track_edit.application_menus.editing_selection_menu.SelectionWidget attribute)

jump_to_node (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) jump_to_previous_btn (napari_track_edit.application_menus.editing_selection_menu.SelectionWidget attribute)

K

keep_in_memory_checkbox (napari_track_edit.import_export.menus.export_dialog.ExportTypeDialog attribute) KEYBINDINGS (in module napari_track_edit.data_views.keybindings_config) KEYBINDINGS_URL (in module napari_track_edit.application_menus.welcome_widget) KEYMAP (in module napari_track_edit.data_views.keybindings_config)

keyPressEvent() (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.table.custom_table_widget.CustomTableWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) keyReleaseEvent() (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method)

L

label (napari_track_edit.application_menus.editing_selection_menu.EditingMenu attribute) (napari_track_edit.application_menus.feature_widget.FeatureWidget attribute) labels_paint_hook() (in module napari_track_edit.data_views.views.ortho_views) layer_changed (napari_track_edit.application_menus.layer_dropdown.LayerDropdown attribute) layer_selection_box (napari_track_edit.motile.menus.run_editor.RunEditor attribute) layer_types (napari_track_edit.application_menus.layer_dropdown.LayerDropdown attribute) LayerDropdown (class in napari_track_edit.application_menus.layer_dropdown) layout (napari_track_edit.application_menus.feature_widget.FeatureWidget attribute) LazyArrayWrapper (class in napari_track_edit.data_views.lazy_array_wrapper) left_only_draw() (in module napari_track_edit.data_views.views.layers.contour_labels) left_only_pick() (in module napari_track_edit.data_views.views.layers.contour_labels) lineage_df (napari_track_edit.data_views.TreeWidget attribute) (napari_track_edit.data_views.views.tree_view.navigation_widget.NavigationWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget attribute) LineageView_LauncherWidget (in module napari_track_edit.application_menus.main_app) link_experimental_clipping_planes() (napari_track_edit.data_views.views.layers.tracks_layer_group.TracksLayerGroup method)

load() (napari_track_edit.motile.backend.motile_run.MotileRun class method) (napari_track_edit.motile.backend.MotileRun class method) load_internal_tracks() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) load_motile_run() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) load_raw (napari_track_edit.example_data.SampleTracks attribute) load_sample_tracks() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) load_segmentation() (napari_track_edit.import_export.menus.segmentation_widgets.CSVSegmentationWidget method) load_sql_tracks() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) load_tracks() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) LOG_FORMAT (in module napari_track_edit.__main__) logger (in module napari_track_edit._wgpu_setup) (in module napari_track_edit.example_data) (in module napari_track_edit.motile.backend.solve) (in module napari_track_edit.motile.menus.motile_widget) (in module napari_track_edit.motile.menus.run_editor) LOGO_HEIGHT (in module napari_track_edit.application_menus.welcome_widget) LOGO_PATH (in module napari_track_edit.application_menus.welcome_widget)

M

main() (in module napari_track_edit.__main__) MainAppWidget (class in napari_track_edit.application_menus.main_app) make_color_source() (in module napari_track_edit.data_views.colormap) make_own_colormap() (in module napari_track_edit.data_views.views.ortho_views) make_slice_request_internal() (napari_track_edit.data_views.views.layers.out_of_slice_points._ZOnlyPointsSlicingState method) map() (napari_track_edit.data_views.colormap.BinaryColorSource method) (napari_track_edit.data_views.colormap.CategoricalColorSource method) (napari_track_edit.data_views.colormap.ColorSource method) (napari_track_edit.data_views.colormap.ConstantColorSource method) (napari_track_edit.data_views.colormap.TrackColormap method) mapping_labels (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget attribute) mapping_layout (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget attribute) mapping_widgets (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget attribute) max_children (napari_track_edit.motile.backend.solver_params.SolverParams attribute) (napari_track_edit.motile.backend.SolverParams attribute) max_edge_distance (napari_track_edit.motile.backend.solver_params.SolverParams attribute) (napari_track_edit.motile.backend.SolverParams attribute) MB (in module napari_track_edit.download_progress) menu_manager (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) MENU_WIDGETS (in module napari_track_edit.application_menus.main_app) menu_widgets (napari_track_edit.application_menus.menu_manager.MenuManager attribute) MenuManager (class in napari_track_edit.application_menus.menu_manager) merge_horizontally() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) merge_nodes_btn (napari_track_edit.application_menus.editing_selection_menu.EditingMenu attribute) MergeTrackIDDialog (class in napari_track_edit.data_views.views_coordinator.user_dialogs) META_KEY (in module napari_track_edit.import_export.sql_io) metadata (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget attribute) mode (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.TreeWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_view_mode_widget.TreeViewModeWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) mode_updated (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) mode_widget (napari_track_edit.application_menus.visualization_widget.VisualizationWidget attribute) (napari_track_edit.data_views.TreeWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget attribute) model_config (napari_track_edit.motile.backend.solver_params.SolverParams attribute) (napari_track_edit.motile.backend.SolverParams attribute) ModeWidget (class in napari_track_edit.application_menus.visualization_widget) module napari_track_edit napari_track_edit.__main__ napari_track_edit._version napari_track_edit._wgpu_setup napari_track_edit.application_menus napari_track_edit.application_menus.copy_from_source_widget napari_track_edit.application_menus.editing_selection_menu napari_track_edit.application_menus.feature_widget napari_track_edit.application_menus.group_widget napari_track_edit.application_menus.layer_dropdown napari_track_edit.application_menus.main_app napari_track_edit.application_menus.menu_manager napari_track_edit.application_menus.track_list_widget napari_track_edit.application_menus.tracking_from_scratch_widget napari_track_edit.application_menus.tracking_widget napari_track_edit.application_menus.visualization_widget napari_track_edit.application_menus.welcome_widget napari_track_edit.data_views napari_track_edit.data_views.colormap napari_track_edit.data_views.dims_utils napari_track_edit.data_views.keybindings_config napari_track_edit.data_views.lazy_array_wrapper napari_track_edit.data_views.node_type napari_track_edit.data_views.views napari_track_edit.data_views.views.layers napari_track_edit.data_views.views.layers.click_utils napari_track_edit.data_views.views.layers.contour_labels napari_track_edit.data_views.views.layers.out_of_slice_points napari_track_edit.data_views.views.layers.track_graph napari_track_edit.data_views.views.layers.track_labels napari_track_edit.data_views.views.layers.track_points napari_track_edit.data_views.views.layers.tracks_layer_group napari_track_edit.data_views.views.ortho_views napari_track_edit.data_views.views.table napari_track_edit.data_views.views.table.custom_table_widget napari_track_edit.data_views.views.tree_view napari_track_edit.data_views.views.tree_view.flip_axes_widget napari_track_edit.data_views.views.tree_view.navigation_widget napari_track_edit.data_views.views.tree_view.tree_plot_fpl napari_track_edit.data_views.views.tree_view.tree_view_feature_widget napari_track_edit.data_views.views.tree_view.tree_view_mode_widget napari_track_edit.data_views.views.tree_view.tree_view_options_widget napari_track_edit.data_views.views.tree_view.tree_widget napari_track_edit.data_views.views.tree_view.tree_widget_utils napari_track_edit.data_views.views_coordinator napari_track_edit.data_views.views_coordinator.groups napari_track_edit.data_views.views_coordinator.node_selection_history napari_track_edit.data_views.views_coordinator.tracks_list napari_track_edit.data_views.views_coordinator.tracks_viewer napari_track_edit.data_views.views_coordinator.user_dialogs napari_track_edit.download_progress napari_track_edit.example_data napari_track_edit.import_export napari_track_edit.import_export.geff_io napari_track_edit.import_export.menus napari_track_edit.import_export.menus.csv_dimension_widget napari_track_edit.import_export.menus.csv_import_widget napari_track_edit.import_export.menus.export_dialog napari_track_edit.import_export.menus.geff_import_utils napari_track_edit.import_export.menus.geff_import_widget napari_track_edit.import_export.menus.import_dialog napari_track_edit.import_export.menus.prop_map_widget napari_track_edit.import_export.menus.scale_widget napari_track_edit.import_export.menus.segmentation_widgets napari_track_edit.import_export.sql_io napari_track_edit.launcher napari_track_edit.motile napari_track_edit.motile.backend napari_track_edit.motile.backend.motile_run napari_track_edit.motile.backend.solve napari_track_edit.motile.backend.solver_params napari_track_edit.motile.menus napari_track_edit.motile.menus.motile_widget napari_track_edit.motile.menus.param_values napari_track_edit.motile.menus.params_editor napari_track_edit.motile.menus.params_viewer napari_track_edit.motile.menus.run_editor napari_track_edit.motile.menus.run_viewer

motile_widget (napari_track_edit.application_menus.tracking_widget.TrackingWidget attribute) MotileRun (class in napari_track_edit.motile.backend) (class in napari_track_edit.motile.backend.motile_run) MotileWidget (class in napari_track_edit.motile.menus) (class in napari_track_edit.motile.menus.motile_widget) Mouse_Embryo_Membrane() (in module napari_track_edit.example_data) Mouse_Embryo_Membrane_raw() (in module napari_track_edit.example_data) mouseMoveEvent() (napari_track_edit.data_views.views.table.custom_table_widget.CustomTableWidget method) mousePressEvent() (napari_track_edit.data_views.views.table.custom_table_widget.CustomTableWidget method) mouseReleaseEvent() (napari_track_edit.data_views.views.table.custom_table_widget.CustomTableWidget method) move() (napari_track_edit.data_views.views.tree_view.navigation_widget.NavigationWidget method)

N

name (napari_track_edit.data_views.views.layers.tracks_layer_group.TracksLayerGroup attribute) (napari_track_edit.data_views.views_coordinator.groups.CollectionButton attribute) (napari_track_edit.data_views.views_coordinator.tracks_list.TracksButton attribute) (napari_track_edit.import_export.ImportDialog attribute) (napari_track_edit.import_export.menus.import_dialog.ImportDialog attribute) napari_track_edit module napari_track_edit.__main__ module napari_track_edit._version module napari_track_edit._wgpu_setup module napari_track_edit.application_menus module napari_track_edit.application_menus.copy_from_source_widget module napari_track_edit.application_menus.editing_selection_menu module napari_track_edit.application_menus.feature_widget module napari_track_edit.application_menus.group_widget module napari_track_edit.application_menus.layer_dropdown module napari_track_edit.application_menus.main_app module napari_track_edit.application_menus.menu_manager module napari_track_edit.application_menus.track_list_widget module napari_track_edit.application_menus.tracking_from_scratch_widget module napari_track_edit.application_menus.tracking_widget module napari_track_edit.application_menus.visualization_widget module napari_track_edit.application_menus.welcome_widget module napari_track_edit.data_views module napari_track_edit.data_views.colormap module napari_track_edit.data_views.dims_utils module napari_track_edit.data_views.keybindings_config module napari_track_edit.data_views.lazy_array_wrapper module napari_track_edit.data_views.node_type module napari_track_edit.data_views.views module napari_track_edit.data_views.views.layers module napari_track_edit.data_views.views.layers.click_utils module napari_track_edit.data_views.views.layers.contour_labels module napari_track_edit.data_views.views.layers.out_of_slice_points module napari_track_edit.data_views.views.layers.track_graph module napari_track_edit.data_views.views.layers.track_labels module napari_track_edit.data_views.views.layers.track_points module napari_track_edit.data_views.views.layers.tracks_layer_group module napari_track_edit.data_views.views.ortho_views module napari_track_edit.data_views.views.table module napari_track_edit.data_views.views.table.custom_table_widget module napari_track_edit.data_views.views.tree_view module napari_track_edit.data_views.views.tree_view.flip_axes_widget module napari_track_edit.data_views.views.tree_view.navigation_widget module napari_track_edit.data_views.views.tree_view.tree_plot_fpl module napari_track_edit.data_views.views.tree_view.tree_view_feature_widget module napari_track_edit.data_views.views.tree_view.tree_view_mode_widget module napari_track_edit.data_views.views.tree_view.tree_view_options_widget module napari_track_edit.data_views.views.tree_view.tree_widget module napari_track_edit.data_views.views.tree_view.tree_widget_utils module napari_track_edit.data_views.views_coordinator module napari_track_edit.data_views.views_coordinator.groups module napari_track_edit.data_views.views_coordinator.node_selection_history module napari_track_edit.data_views.views_coordinator.tracks_list module

napari_track_edit.data_views.views_coordinator.tracks_viewer module napari_track_edit.data_views.views_coordinator.user_dialogs module napari_track_edit.download_progress module napari_track_edit.example_data module napari_track_edit.import_export module napari_track_edit.import_export.geff_io module napari_track_edit.import_export.menus module napari_track_edit.import_export.menus.csv_dimension_widget module napari_track_edit.import_export.menus.csv_import_widget module napari_track_edit.import_export.menus.export_dialog module napari_track_edit.import_export.menus.geff_import_utils module napari_track_edit.import_export.menus.geff_import_widget module napari_track_edit.import_export.menus.import_dialog module napari_track_edit.import_export.menus.prop_map_widget module napari_track_edit.import_export.menus.scale_widget module napari_track_edit.import_export.menus.segmentation_widgets module napari_track_edit.import_export.sql_io module napari_track_edit.launcher module napari_track_edit.motile module napari_track_edit.motile.backend module napari_track_edit.motile.backend.motile_run module napari_track_edit.motile.backend.solve module napari_track_edit.motile.backend.solver_params module napari_track_edit.motile.menus module napari_track_edit.motile.menus.motile_widget module napari_track_edit.motile.menus.param_values module napari_track_edit.motile.menus.params_editor module napari_track_edit.motile.menus.params_viewer module napari_track_edit.motile.menus.run_editor module napari_track_edit.motile.menus.run_viewer module navigation_widget (napari_track_edit.data_views.TreeWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget attribute) NavigationWidget (class in napari_track_edit.data_views.views.tree_view.navigation_widget) ndim (napari_track_edit.data_views.lazy_array_wrapper.LazyArrayWrapper property) ndim_offset (napari_track_edit.data_views.dims_utils.TracksDims property) ndim_tracks (napari_track_edit.data_views.dims_utils.TracksDims attribute), [1] ndim_world (napari_track_edit.data_views.dims_utils.TracksDims attribute), [1] needs_own_colormap() (in module napari_track_edit.data_views.views.ortho_views) negative (napari_track_edit.motile.menus.params_editor.EditableParam attribute) new_colormap() (napari_track_edit.data_views.TrackLabels method) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels method) new_group_button (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget attribute) new_label() (in module napari_track_edit.data_views.views.layers.track_labels) (napari_track_edit.data_views.TrackLabels method) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels method) new_params (napari_track_edit.motile.menus.params_editor.SolverParamsEditor attribute) (napari_track_edit.motile.menus.params_viewer.SolverParamsViewer attribute) new_run (napari_track_edit.motile.menus.motile_widget.MotileWidget attribute) (napari_track_edit.motile.menus.MotileWidget attribute) new_run() (napari_track_edit.motile.menus.run_editor.RunEditor method) new_track_btn (napari_track_edit.application_menus.editing_selection_menu.EditingMenu attribute) next_node() (napari_track_edit.data_views.NodeSelectionHistory method) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory method) node_attrs (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget attribute) node_clicked (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) node_count (napari_track_edit.data_views.views_coordinator.groups.CollectionButton attribute) node_index_dict (napari_track_edit.data_views.TrackPoints attribute) (napari_track_edit.data_views.views.layers.track_points.TrackPoints attribute) node_selection_updated (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) nodes (napari_track_edit.data_views.colormap.TrackColormap property) (napari_track_edit.data_views.TrackPoints attribute) (napari_track_edit.data_views.views.layers.track_points.TrackPoints attribute) nodes_selected (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) NodeSelectionHistory (class in napari_track_edit.data_views) (class in napari_track_edit.data_views.views_coordinator.node_selection_history) NodeType (class in napari_track_edit.data_views.node_type) none_radio (napari_track_edit.import_export.menus.segmentation_widgets.CSVSegmentationWidget attribute) (napari_track_edit.import_export.menus.segmentation_widgets.GeffSegmentationWidget attribute) NoSelectionHighlightDelegate (class in napari_track_edit.data_views.views.table.custom_table_widget)

O

ok_button (napari_track_edit.import_export.menus.segmentation_widgets.FileFolderDialog attribute) on_disk_label (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList attribute) opacity (napari_track_edit.application_menus.visualization_widget.VisualizationConfigWidget attribute) optional_features (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget attribute) optional_mapping_layout (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget attribute) OptionalEditableParam (class in napari_track_edit.motile.menus.params_editor) options_widget (napari_track_edit.data_views.TreeWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget attribute)

order_roots_by_prev() (in module napari_track_edit.data_views.views.tree_view.tree_widget_utils) others (napari_track_edit.data_views.views.layers.out_of_slice_points._ZOnlyPointSliceRequest attribute) overlap_size (napari_track_edit.motile.backend.solver_params.SolverParams attribute) (napari_track_edit.motile.backend.SolverParams attribute) overlap_size_must_be_positive() (napari_track_edit.motile.backend.solver_params.SolverParams class method) (napari_track_edit.motile.backend.SolverParams class method) overlap_size_row (napari_track_edit.motile.menus.params_editor.SolverParamsEditor attribute)

P

paint() (napari_track_edit.data_views.views.table.custom_table_widget.NoSelectionHighlightDelegate method) paint_event_hook() (in module napari_track_edit.data_views.views.ortho_views) param_categories (napari_track_edit.motile.menus.params_editor.SolverParamsEditor attribute) (napari_track_edit.motile.menus.params_viewer.SolverParamsViewer attribute) param_label (napari_track_edit.motile.menus.params_editor.EditableParam attribute) (napari_track_edit.motile.menus.params_viewer.ParamView attribute) param_name (napari_track_edit.motile.menus.params_editor.EditableParam attribute) (napari_track_edit.motile.menus.params_viewer.ParamView attribute) param_value (napari_track_edit.motile.menus.params_editor.EditableParam attribute) (napari_track_edit.motile.menus.params_viewer.ParamView attribute) PARAMS_FILENAME (in module napari_track_edit.motile.backend.motile_run) params_widget (napari_track_edit.motile.menus.run_viewer.RunViewer attribute) ParamView (class in napari_track_edit.motile.menus.params_viewer) path_line_edit (napari_track_edit.import_export.menus.segmentation_widgets.FileFolderDialog attribute) pick_track_id (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) pick_track_id() (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget method) PIN_ATTR (in module napari_track_edit.motile.backend.solve) PIN_SELECTED (in module napari_track_edit.motile.backend.solve)

PIN_UNSELECTED (in module napari_track_edit.motile.backend.solve) PIN_UNSET (in module napari_track_edit.motile.backend.solve) PINK (in module napari_track_edit.data_views.colormap) plot_type (napari_track_edit.data_views.TreeWidget attribute) (napari_track_edit.data_views.views.tree_view.navigation_widget.NavigationWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) (napari_track_edit.data_views.views.tree_view.tree_view_feature_widget.TreeViewFeatureWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget attribute) plot_type_widget (napari_track_edit.data_views.TreeWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget attribute) point_data_hook() (in module napari_track_edit.data_views.views.ortho_views) points_layer (napari_track_edit.data_views.views.layers.tracks_layer_group.TracksLayerGroup attribute) process_click() (napari_track_edit.data_views.TrackLabels method) (napari_track_edit.data_views.TrackPoints method) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels method) (napari_track_edit.data_views.views.layers.track_points.TrackPoints method) prop_map_widget (napari_track_edit.import_export.ImportDialog attribute) (napari_track_edit.import_export.menus.import_dialog.ImportDialog attribute) props_updated (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget attribute)

Q

QT_BUTTON_TO_INT (in module napari_track_edit.data_views.views.layers.click_utils)

R

radio_2D (napari_track_edit.import_export.menus.csv_dimension_widget.DimensionWidget attribute) radio_3D (napari_track_edit.import_export.menus.csv_dimension_widget.DimensionWidget attribute) radio_group (napari_track_edit.application_menus.visualization_widget.ModeWidget attribute) raw_data_is_downloaded() (in module napari_track_edit.example_data) raw_name (napari_track_edit.example_data.SampleTracks attribute) raw_size (napari_track_edit.example_data.SampleTracks attribute) raw_zarr (napari_track_edit.example_data.SampleTracks attribute) read_ctc_dataset() (in module napari_track_edit.example_data) read_zenodo_dataset() (in module napari_track_edit.example_data) rebind (napari_track_edit.import_export.menus.export_dialog.ExportTypeDialog property) rebind_tracks_to_graph() (in module napari_track_edit.import_export.sql_io) redo() (napari_track_edit.data_views.TrackLabels method) (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.layers.contour_labels.ContourLabels method) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) redo_btn (napari_track_edit.application_menus.editing_selection_menu.EditingMenu attribute) refresh_colormap() (napari_track_edit.data_views.views.layers.contour_labels.ContourLabels method) refresh_func (napari_track_edit.data_views.views.tree_view.tree_view_feature_widget.RefreshingComboBox attribute) RefreshingComboBox (class in napari_track_edit.data_views.views.tree_view.tree_view_feature_widget) relabel_checkbox (napari_track_edit.import_export.menus.export_dialog.ExportTypeDialog attribute) related_object_radio_buttons (napari_track_edit.import_export.menus.segmentation_widgets.GeffSegmentationWidget attribute) related_objects_layout (napari_track_edit.import_export.menus.segmentation_widgets.GeffSegmentationWidget attribute) remove_lineage_btn (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget attribute) remove_napari_layer() (napari_track_edit.data_views.views.layers.tracks_layer_group.TracksLayerGroup method) remove_napari_layers() (napari_track_edit.data_views.views.layers.tracks_layer_group.TracksLayerGroup method) remove_node() (napari_track_edit.data_views.colormap.TrackColormap method)

remove_node_btn (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget attribute) remove_track_btn (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget attribute) remove_tracks() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) ReportHook (in module napari_track_edit.example_data) request_colormap (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList attribute) request_new_track() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) reselect_btn (napari_track_edit.application_menus.editing_selection_menu.SelectionWidget attribute) RESERVED_PROPS (in module napari_track_edit.import_export.menus.prop_map_widget) reset() (napari_track_edit.data_views.NodeSelectionHistory method) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory method) reset_progress() (napari_track_edit.motile.menus.run_viewer.RunViewer method) reset_scrolled() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) resolve_key_action() (in module napari_track_edit.data_views.keybindings_config) restore() (napari_track_edit.data_views.NodeSelectionHistory method) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory method) restore_selection() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) retrieve_existing_groups() (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget method) root (napari_track_edit.import_export.menus.geff_import_widget.ImportGeffWidget attribute) (napari_track_edit.import_export.menus.segmentation_widgets.GeffSegmentationWidget attribute) rowCount() (napari_track_edit.data_views.views.table.custom_table_widget.TrackTableModel method) run (napari_track_edit.motile.menus.run_viewer.RunViewer attribute) run_name (napari_track_edit.motile.backend.motile_run.MotileRun attribute) (napari_track_edit.motile.backend.MotileRun attribute) (napari_track_edit.motile.menus.run_editor.RunEditor attribute) RunEditor (class in napari_track_edit.motile.menus.run_editor) RunViewer (class in napari_track_edit.motile.menus.run_viewer)

S

SAMPLE_TRACKS (in module napari_track_edit.example_data) sample_tracks_path() (in module napari_track_edit.example_data) SampleTracks (class in napari_track_edit.example_data) save (napari_track_edit.data_views.views_coordinator.tracks_list.TracksButton attribute) save() (napari_track_edit.motile.backend.motile_run.MotileRun method) (napari_track_edit.motile.backend.MotileRun method) save_browse_button (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList attribute) save_dir_line (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList attribute) save_name_line (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList attribute) save_path() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) save_segmentation (napari_track_edit.import_export.menus.export_dialog.ExportTypeDialog property) save_tracks() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) scale (napari_track_edit.import_export.menus.scale_widget.ScaleWidget attribute) scale_layout (napari_track_edit.import_export.menus.scale_widget.ScaleWidget attribute) scale_widget (napari_track_edit.import_export.ImportDialog attribute) (napari_track_edit.import_export.menus.import_dialog.ImportDialog attribute) ScaledSvgWidget (class in napari_track_edit.application_menus.copy_from_source_widget) ScaleWidget (class in napari_track_edit.import_export.menus.scale_widget) scroll_area (napari_track_edit.import_export.ImportDialog attribute) (napari_track_edit.import_export.menus.import_dialog.ImportDialog attribute) scroll_to_node() (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget method) scroll_to_row() (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget method) scrolled (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot property) seg (napari_track_edit.import_export.ImportDialog attribute) (napari_track_edit.import_export.menus.import_dialog.ImportDialog attribute) (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget attribute) seg_checkbox (napari_track_edit.import_export.menus.export_dialog.ExportTypeDialog attribute) seg_file_format (napari_track_edit.import_export.menus.export_dialog.ExportTypeDialog property) seg_for_features (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget attribute) seg_format_combo (napari_track_edit.import_export.menus.export_dialog.ExportTypeDialog attribute) seg_format_label (napari_track_edit.import_export.menus.export_dialog.ExportTypeDialog attribute) seg_label (napari_track_edit.import_export.menus.segmentation_widgets.ExternalSegmentationWidget attribute) seg_label_attr (napari_track_edit.import_export.menus.export_dialog.ExportTypeDialog property) seg_layer (napari_track_edit.data_views.views.layers.tracks_layer_group.TracksLayerGroup attribute) seg_path_updated (napari_track_edit.import_export.menus.segmentation_widgets.ExternalSegmentationWidget attribute) seg_updated (napari_track_edit.import_export.menus.segmentation_widgets.CSVSegmentationWidget attribute) (napari_track_edit.import_export.menus.segmentation_widgets.GeffSegmentationWidget attribute) segmentation_widget (napari_track_edit.import_export.menus.segmentation_widgets.CSVSegmentationWidget attribute) (napari_track_edit.import_export.menus.segmentation_widgets.GeffSegmentationWidget attribute) select_merge_track_id() (in module napari_track_edit.data_views.views_coordinator.user_dialogs) select_next() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) select_next_set_btn (napari_track_edit.application_menus.editing_selection_menu.SelectionWidget attribute) select_node_set_from_history() (napari_track_edit.data_views.NodeSelectionHistory method) (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) select_nodes_in_group_btn (napari_track_edit.data_views.views_coordinator.groups.CollectionButton attribute) select_points_in_rect() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) select_previous() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) select_previous_set_btn (napari_track_edit.application_menus.editing_selection_menu.SelectionWidget attribute) select_track_id_from_node() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) selected_collection (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget attribute) selected_data (napari_track_edit.data_views.TrackPoints property) (napari_track_edit.data_views.views.layers.track_points.TrackPoints property) selected_layer (napari_track_edit.application_menus.layer_dropdown.LayerDropdown attribute) selected_layers (napari_track_edit.application_menus.feature_widget.IntensityLayerDialog property) selected_nodes (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.TreeWidget attribute) (napari_track_edit.data_views.views.tree_view.navigation_widget.NavigationWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) selected_track (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) selection_updated (napari_track_edit.data_views.NodeSelectionHistory attribute) (napari_track_edit.data_views.views_coordinator.node_selection_history.NodeSelectionHistory attribute) selection_widget (napari_track_edit.application_menus.editing_selection_menu.EditingSelectionWidget attribute) SelectionWidget (class in napari_track_edit.application_menus.editing_selection_menu) set_alpha() (napari_track_edit.data_views.colormap.TrackColormap method) set_axis_labels() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) set_color_feature() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) set_colormap_to_trackslist() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) set_data() (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget method) set_display_mode() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) set_division() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) set_division_btn (napari_track_edit.application_menus.editing_selection_menu.EditingMenu attribute) set_feature() (napari_track_edit.data_views.colormap.TrackColormap method) set_foreground_tabs() (napari_track_edit.application_menus.menu_manager.MenuManager method) set_keybinds() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) set_layer_types() (napari_track_edit.application_menus.layer_dropdown.LayerDropdown method) set_max_frames() (napari_track_edit.motile.menus.params_editor.SolverParamsEditor method) set_mouse_enabled() (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method)

set_new_track_id() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) set_opacity() (napari_track_edit.data_views.views.layers.contour_labels.ContourLabels method) set_point_size() (napari_track_edit.data_views.TrackPoints method) (napari_track_edit.data_views.views.layers.track_points.TrackPoints method) set_selection() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) set_show_hover_info() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) set_show_track_ids() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) set_tabbar_location() (napari_track_edit.application_menus.menu_manager.MenuManager method) set_table() (napari_track_edit.data_views.views.table.custom_table_widget.TrackTableModel method) set_track_id_color() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) set_tracks() (napari_track_edit.data_views.colormap.TrackColormap method) (napari_track_edit.data_views.views.layers.tracks_layer_group.TracksLayerGroup method) set_view() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) setMouseEnabled() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) shape (napari_track_edit.data_views.lazy_array_wrapper.LazyArrayWrapper property) shift (in module napari_track_edit.data_views.keybindings_config), [1] show_all_radio (napari_track_edit.data_views.views.tree_view.tree_view_mode_widget.TreeViewModeWidget attribute) show_area_radio (napari_track_edit.data_views.views.tree_view.tree_view_feature_widget.TreeViewFeatureWidget attribute) show_export_dialog() (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList method) (napari_track_edit.import_export.menus.export_dialog.ExportDialog static method) show_hover_info (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) show_hover_info_changed (napari_track_edit.data_views.views.tree_view.tree_view_options_widget.TreeViewOptionsWidget attribute) show_lineage_radio (napari_track_edit.data_views.views.tree_view.tree_view_mode_widget.TreeViewModeWidget attribute) show_ortho_views (napari_track_edit.application_menus.visualization_widget.VisualizationWidget attribute) show_track_ids (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) show_track_ids_changed (napari_track_edit.data_views.views.tree_view.tree_view_options_widget.TreeViewOptionsWidget attribute) show_tree_radio (napari_track_edit.data_views.views.tree_view.tree_view_feature_widget.TreeViewFeatureWidget attribute) show_viewer_overlay (napari_track_edit.application_menus.visualization_widget.VisualizationWidget attribute) showEvent() (napari_track_edit.application_menus.visualization_widget.ColorByWidget method) shown (napari_track_edit.data_views.views.layers.out_of_slice_points._ZOnlyPointSliceRequest attribute) showPopup() (napari_track_edit.data_views.views.tree_view.tree_view_feature_widget.RefreshingComboBox method) shuffle() (napari_track_edit.data_views.colormap.BinaryColorSource method) (napari_track_edit.data_views.colormap.CategoricalColorSource method) (napari_track_edit.data_views.colormap.ColorSource method) (napari_track_edit.data_views.colormap.ConstantColorSource method) single_window_start (napari_track_edit.motile.backend.solver_params.SolverParams attribute) (napari_track_edit.motile.backend.SolverParams attribute) single_window_start_row (napari_track_edit.motile.menus.params_editor.SolverParamsEditor attribute) size (napari_track_edit.data_views.lazy_array_wrapper.LazyArrayWrapper property) (napari_track_edit.data_views.views.layers.out_of_slice_points._ZOnlyPointSliceRequest attribute) size_layer_dropdown (napari_track_edit.application_menus.tracking_from_scratch_widget.TrackingFromScratch attribute) sizeHint() (napari_track_edit.application_menus.copy_from_source_widget.ScaledSvgWidget method) (napari_track_edit.data_views.views_coordinator.groups.CollectionButton method) (napari_track_edit.data_views.views_coordinator.tracks_list.TracksButton method) solve() (in module napari_track_edit.motile.backend) (in module napari_track_edit.motile.backend.solve) solve_with_motile() (napari_track_edit.motile.menus.motile_widget.MotileWidget method) (napari_track_edit.motile.menus.MotileWidget method) solver_event_update() (napari_track_edit.motile.menus.run_viewer.RunViewer method) solver_label (napari_track_edit.motile.menus.run_viewer.RunViewer attribute) solver_params (napari_track_edit.motile.backend.motile_run.MotileRun attribute) (napari_track_edit.motile.backend.MotileRun attribute) (napari_track_edit.motile.menus.params_editor.SolverParamsEditor attribute) (napari_track_edit.motile.menus.params_viewer.SolverParamsViewer attribute) solver_params_widget (napari_track_edit.motile.menus.run_editor.RunEditor attribute) solver_update (napari_track_edit.motile.menus.motile_widget.MotileWidget attribute) (napari_track_edit.motile.menus.MotileWidget attribute) SolverParams (class in napari_track_edit.motile.backend) (class in napari_track_edit.motile.backend.solver_params) SolverParamsEditor (class in napari_track_edit.motile.menus.params_editor) SolverParamsViewer (class in napari_track_edit.motile.menus.params_viewer) source_layer_dropdown (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget attribute) source_path (napari_track_edit.import_export.ImportDialog attribute) (napari_track_edit.import_export.menus.import_dialog.ImportDialog attribute) SPECIAL_KEYBINDS (in module napari_track_edit.data_views.keybindings_config) SPLIT (napari_track_edit.data_views.node_type.NodeType attribute) sql_database_path() (in module napari_track_edit.import_export.sql_io) SQL_EXPORT_TYPE (in module napari_track_edit.import_export.menus.export_dialog) SQL_LOAD_OPTION (in module napari_track_edit.data_views.views_coordinator.tracks_list) SQL_SUFFIX (in module napari_track_edit.import_export.sql_io) STAMP_FORMAT (in module napari_track_edit.motile.backend.motile_run) StandardFieldMapWidget (class in napari_track_edit.import_export.menus.prop_map_widget) start_labels_btn (napari_track_edit.application_menus.tracking_from_scratch_widget.TrackingFromScratch attribute) start_points_btn (napari_track_edit.application_menus.tracking_from_scratch_widget.TrackingFromScratch attribute) start_run (napari_track_edit.motile.menus.run_editor.RunEditor attribute) StartupWidget (class in napari_track_edit) (class in napari_track_edit.application_menus) (class in napari_track_edit.application_menus.main_app) StaticParamValue (class in napari_track_edit.motile.menus.param_values) status (napari_track_edit.motile.backend.motile_run.MotileRun attribute) (napari_track_edit.motile.backend.MotileRun attribute) store_name (napari_track_edit.example_data.SampleTracks attribute) store_path (napari_track_edit.import_export.menus.geff_import_widget.ImportGeffWidget attribute) swap_nodes() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) swap_nodes_btn (napari_track_edit.application_menus.editing_selection_menu.EditingMenu attribute) symbolmap (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) sync_filters (in module napari_track_edit.data_views.views.ortho_views)

T

Table_LauncherWidget (in module napari_track_edit.application_menus.main_app) table_widget_present (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) tabs (napari_track_edit.application_menus.editing_selection_menu.EditingSelectionWidget attribute) TernaryPin (class in napari_track_edit.motile.backend.solve) time (napari_track_edit.motile.backend.motile_run.MotileRun attribute) (napari_track_edit.motile.backend.MotileRun attribute) time_axis (napari_track_edit.data_views.dims_utils.TracksDims property) title (napari_track_edit.motile.menus.params_editor.EditableParam attribute) (napari_track_edit.motile.menus.params_viewer.ParamView attribute) to_direct_colormap() (napari_track_edit.data_views.colormap.TrackColormap method) to_tracks_axis() (napari_track_edit.data_views.dims_utils.TracksDims method) toggle_display_mode() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) toggle_enable() (napari_track_edit.motile.menus.params_editor.OptionalEditableParam method) toggle_feature_mode() (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) toggle_menu_panel_visibility() (napari_track_edit.application_menus.menu_manager.MenuManager method) toggle_ortho_views() (napari_track_edit.application_menus.visualization_widget.VisualizationWidget method) toggle_viewer_text_overlay() (napari_track_edit.application_menus.visualization_widget.VisualizationWidget method) toggle_visible() (napari_track_edit.motile.menus.params_editor.OptionalEditableParam method) track_colormap (napari_track_edit.data_views.TrackLabels attribute) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels attribute) track_df (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views.tree_view.navigation_widget.NavigationWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) track_id (napari_track_edit.data_views.views_coordinator.user_dialogs.MergeTrackIDDialog attribute) track_id_btns (napari_track_edit.data_views.views_coordinator.user_dialogs.MergeTrackIDDialog attribute) track_id_color (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) track_ids_checkbox (napari_track_edit.data_views.views.tree_view.tree_view_options_widget.TreeViewOptionsWidget attribute) track_layers_hook() (in module napari_track_edit.data_views.views.ortho_views) TrackColormap (class in napari_track_edit.data_views.colormap) TrackGraph (class in napari_track_edit.data_views) (class in napari_track_edit.data_views.views.layers.track_graph) tracking_from_scratch (napari_track_edit.application_menus.tracking_widget.TrackingWidget attribute) Tracking_LauncherWidget (in module napari_track_edit.application_menus.main_app) tracking_layers (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) TrackingFromScratch (class in napari_track_edit.application_menus.tracking_from_scratch_widget) TrackingGroupWidget (class in napari_track_edit.application_menus.main_app) TrackingWidget (class in napari_track_edit.application_menus.tracking_widget) TrackLabels (class in napari_track_edit.data_views) (class in napari_track_edit.data_views.views.layers.track_labels) TrackList_LauncherWidget (in module napari_track_edit.application_menus.main_app) TrackListWidget (class in napari_track_edit.application_menus.track_list_widget) TrackPoints (class in napari_track_edit.data_views) (class in napari_track_edit.data_views.views.layers.track_points) tracks (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views.layers.tracks_layer_group.TracksLayerGroup attribute) (napari_track_edit.data_views.views_coordinator.tracks_list.TracksButton attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute)

tracks_cleared (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList attribute) tracks_dims (napari_track_edit.data_views.TracksViewer property) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer property) tracks_from_sql() (in module napari_track_edit.import_export.sql_io) tracks_layer (napari_track_edit.data_views.views.layers.tracks_layer_group.TracksLayerGroup attribute) tracks_list (napari_track_edit.application_menus.track_list_widget.TrackListWidget attribute) (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) tracks_loaded (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList attribute) tracks_saved (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList attribute) tracks_updated (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) tracks_viewer (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget attribute) (napari_track_edit.application_menus.editing_selection_menu.EditingMenu attribute) (napari_track_edit.application_menus.editing_selection_menu.EditingSelectionWidget attribute) (napari_track_edit.application_menus.editing_selection_menu.SelectionWidget attribute) (napari_track_edit.application_menus.feature_widget.FeatureWidget attribute) (napari_track_edit.application_menus.menu_manager.MenuManager attribute) (napari_track_edit.application_menus.tracking_from_scratch_widget.TrackingFromScratch attribute) (napari_track_edit.application_menus.visualization_widget.ColorByWidget attribute) (napari_track_edit.application_menus.visualization_widget.VisualizationWidget attribute) (napari_track_edit.data_views.TrackGraph attribute) (napari_track_edit.data_views.TrackLabels attribute) (napari_track_edit.data_views.TrackPoints attribute) (napari_track_edit.data_views.TreeWidget attribute) (napari_track_edit.data_views.views.layers.track_graph.TrackGraph attribute) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels attribute) (napari_track_edit.data_views.views.layers.track_points.TrackPoints attribute) (napari_track_edit.data_views.views.layers.tracks_layer_group.TracksLayerGroup attribute) (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget attribute) (napari_track_edit.data_views.views_coordinator.groups.CollectionWidget attribute) TracksButton (class in napari_track_edit.data_views.views_coordinator.tracks_list) TracksDims (class in napari_track_edit.data_views.dims_utils) TracksLayerGroup (class in napari_track_edit.data_views.views.layers.tracks_layer_group) TracksList (class in napari_track_edit.data_views.views_coordinator.tracks_list) TracksViewer (class in napari_track_edit.data_views) (class in napari_track_edit.data_views.views_coordinator.tracks_viewer) TrackTableModel (class in napari_track_edit.data_views.views.table.custom_table_widget) tree_widget (napari_track_edit.data_views.TreeWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget attribute) TREE_WIDGET_MODIFIER_ACTIONS (in module napari_track_edit.data_views.keybindings_config) TREE_WIDGET_NAVIGATION_KEYS (in module napari_track_edit.data_views.keybindings_config) tree_widget_present (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) TREE_WIDGET_SPECIFIC_ACTIONS (in module napari_track_edit.data_views.keybindings_config) TreePlot (class in napari_track_edit.data_views.views.tree_view.tree_plot_fpl) TreeViewFeatureWidget (class in napari_track_edit.data_views.views.tree_view.tree_view_feature_widget) TreeViewModeWidget (class in napari_track_edit.data_views.views.tree_view.tree_view_mode_widget) TreeViewOptionsWidget (class in napari_track_edit.data_views.views.tree_view.tree_view_options_widget) TreeWidget (class in napari_track_edit.data_views) (class in napari_track_edit.data_views.views.tree_view.tree_widget) true_color (napari_track_edit.data_views.colormap.BinaryColorSource attribute) TUTORIAL_URL (in module napari_track_edit.application_menus.welcome_widget)

U

ui_default (napari_track_edit.motile.menus.params_editor.OptionalEditableParam attribute) undo() (napari_track_edit.data_views.TrackLabels method) (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.TreeWidget method) (napari_track_edit.data_views.views.layers.contour_labels.ContourLabels method) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels method) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) undo_btn (napari_track_edit.application_menus.editing_selection_menu.EditingMenu attribute) unlink_experimental_clipping_planes() (napari_track_edit.data_views.views.layers.tracks_layer_group.TracksLayerGroup method) update() (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot method) (napari_track_edit.import_export.menus.scale_widget.ScaleWidget method) update_buttons (napari_track_edit.import_export.menus.csv_import_widget.ImportCSVWidget attribute) (napari_track_edit.import_export.menus.geff_import_widget.ImportGeffWidget attribute) update_buttons() (napari_track_edit.application_menus.editing_selection_menu.EditingMenu method) update_data() (napari_track_edit.data_views.views.table.custom_table_widget.ColoredTableWidget method) update_dims (napari_track_edit.import_export.menus.csv_dimension_widget.DimensionWidget attribute) update_feature_dropdown() (napari_track_edit.data_views.views.tree_view.tree_view_feature_widget.TreeViewFeatureWidget method) update_from_params() (napari_track_edit.motile.menus.params_editor.EditableParam method) (napari_track_edit.motile.menus.params_editor.OptionalEditableParam method) (napari_track_edit.motile.menus.params_viewer.ParamView method) update_label_colormap() (napari_track_edit.data_views.TrackLabels method) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels method) update_labels_layers() (napari_track_edit.motile.menus.run_editor.RunEditor method) update_layer_selection() (napari_track_edit.motile.menus.run_editor.RunEditor method) update_mapping() (napari_track_edit.import_export.menus.prop_map_widget.StandardFieldMapWidget method) update_mode (napari_track_edit.application_menus.visualization_widget.ModeWidget attribute) update_napari_tracks() (in module napari_track_edit.data_views.views.layers.track_graph)

update_node_count() (napari_track_edit.data_views.views_coordinator.groups.CollectionButton method) update_point_outline() (napari_track_edit.data_views.TrackPoints method) (napari_track_edit.data_views.views.layers.track_points.TrackPoints method) update_root() (napari_track_edit.import_export.menus.segmentation_widgets.GeffSegmentationWidget method) update_run() (napari_track_edit.motile.menus.run_viewer.RunViewer method) update_selected_label() (napari_track_edit.data_views.TrackLabels method) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels method) update_selection (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) update_selection() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) update_selection_buttons() (napari_track_edit.application_menus.editing_selection_menu.SelectionWidget method) update_track_df() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) update_track_id (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) update_track_id_color() (napari_track_edit.application_menus.editing_selection_menu.EditingMenu method) update_track_visibility() (napari_track_edit.data_views.TrackGraph method) (napari_track_edit.data_views.views.layers.track_graph.TrackGraph method) update_tracks() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) update_value() (napari_track_edit.motile.menus.param_values.EditableParamValue method) (napari_track_edit.motile.menus.param_values.StaticParamValue method) update_visible() (napari_track_edit.data_views.views.layers.tracks_layer_group.TracksLayerGroup method) update_visualization (napari_track_edit.application_menus.visualization_widget.VisualizationConfigWidget attribute) updates_from_index_atoms() (in module napari_track_edit.data_views.views.layers.track_labels) updates_from_masked_atoms() (in module napari_track_edit.data_views.views.layers.track_labels) url (napari_track_edit.example_data.SampleTracks attribute) user_data_dir() (in module napari_track_edit.example_data)

V

valid (napari_track_edit.import_export.menus.segmentation_widgets.ExternalSegmentationWidget attribute) valueChanged (napari_track_edit.motile.menus.param_values.EditableParamValue attribute) (napari_track_edit.motile.menus.param_values.StaticParamValue attribute) version (in module napari_track_edit._version) version_tuple (in module napari_track_edit._version) view_direction (napari_track_edit.data_views.TreeWidget attribute) (napari_track_edit.data_views.views.tree_view.navigation_widget.NavigationWidget attribute) (napari_track_edit.data_views.views.tree_view.tree_plot_fpl.TreePlot attribute) (napari_track_edit.data_views.views.tree_view.tree_widget.TreeWidget attribute) view_run() (napari_track_edit.motile.menus.motile_widget.MotileWidget method) (napari_track_edit.motile.menus.MotileWidget method) view_run_widget (napari_track_edit.motile.menus.motile_widget.MotileWidget attribute) (napari_track_edit.motile.menus.MotileWidget attribute) view_tracks (napari_track_edit.data_views.views_coordinator.tracks_list.TracksList attribute) viewer (in module napari_track_edit.launcher) (napari_track_edit.application_menus.copy_from_source_widget.CopyFromSourceWidget attribute) (napari_track_edit.application_menus.feature_widget.FeatureWidget attribute) (napari_track_edit.application_menus.layer_dropdown.LayerDropdown attribute) (napari_track_edit.application_menus.main_app.StartupWidget attribute) (napari_track_edit.application_menus.menu_manager.MenuManager attribute) (napari_track_edit.application_menus.StartupWidget attribute) (napari_track_edit.application_menus.tracking_from_scratch_widget.TrackingFromScratch attribute) (napari_track_edit.application_menus.visualization_widget.VisualizationWidget attribute) (napari_track_edit.application_menus.welcome_widget.WelcomeWidget attribute) (napari_track_edit.data_views.TrackLabels attribute) (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views.layers.track_labels.TrackLabels attribute) (napari_track_edit.data_views.views.layers.tracks_layer_group.TracksLayerGroup attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) (napari_track_edit.motile.menus.motile_widget.MotileWidget attribute) (napari_track_edit.motile.menus.MotileWidget attribute) (napari_track_edit.motile.menus.run_editor.RunEditor attribute) (napari_track_edit.StartupWidget attribute)

viewer_interaction() (napari_track_edit.data_views.TracksViewer method) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer method) visible (napari_track_edit.data_views.TracksViewer attribute) (napari_track_edit.data_views.views_coordinator.tracks_viewer.TracksViewer attribute) visible_menus (napari_track_edit.application_menus.menu_manager.MenuManager attribute) visible_tracks (napari_track_edit.data_views.TrackGraph attribute) (napari_track_edit.data_views.views.layers.track_graph.TrackGraph attribute) Visualization_LauncherWidget (in module napari_track_edit.application_menus.main_app) VisualizationConfigWidget (class in napari_track_edit.application_menus.visualization_widget) VisualizationWidget (class in napari_track_edit.application_menus.visualization_widget)

W

wait_for_release() (in module napari_track_edit.data_views.views.layers.click_utils) WelcomeWidget (class in napari_track_edit.application_menus.welcome_widget) window_size (napari_track_edit.motile.backend.solver_params.SolverParams attribute) (napari_track_edit.motile.backend.SolverParams attribute) window_size_must_be_at_least_two() (napari_track_edit.motile.backend.solver_params.SolverParams class method) (napari_track_edit.motile.backend.SolverParams class method)

window_size_row (napari_track_edit.motile.menus.params_editor.SolverParamsEditor attribute) wrapped (napari_track_edit.data_views.lazy_array_wrapper.LazyArrayWrapper property) write_geff_over() (in module napari_track_edit.import_export.geff_io) write_tracks_to_sql() (in module napari_track_edit.import_export.sql_io)

Z

ZENODO_ARRAYS (in module napari_track_edit.example_data) ZENODO_LABELS_URL (in module napari_track_edit.example_data)

ZENODO_RAW_URL (in module napari_track_edit.example_data) ZOnlyPoints (in module napari_track_edit.data_views.views.layers.out_of_slice_points)